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object --+ | Application.AbstractCommandline --+ | _BlastCommandLine
Base Commandline object for (classic) NCBI BLAST wrappers (PRIVATE).
This is provided for subclassing, it deals with shared options common to all the BLAST tools (blastall, rpsblast, blastpgp).
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Create a new instance of a command line wrapper object.
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Make sure the required parameters have been set (PRIVATE). No return value - it either works or raises a ValueError. This is a separate method (called from __str__) so that subclasses may override it.
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