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Functions to calculate assorted sequence checksums.
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Returns the GCG checksum (int) for a sequence (string or Seq object) Given a nucleotide or amino-acid secuence (or any string), returns the GCG checksum (int). Checksum used by GCG program. seq type = str. Based on BioPerl GCG_checksum. Adapted by Sebastian Bassi with the help of John Lenton, Pablo Ziliani, and Gabriel Genellina. All sequences are converted to uppercase |
Returns the SEGUID (string) for a sequence (string or Seq object) Given a nucleotide or amino-acid secuence (or any string), returns the SEGUID string (A SEquence Globally Unique IDentifier). seq type = str. For more information about SEGUID, see: http://bioinformatics.anl.gov/seguid/ DOI: 10.1002/pmic.200600032 |
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_table_h
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