Package Bio :: Package SeqIO :: Module _index :: Class PhdDict
[hide private]
[frames] | no frames]

Class PhdDict

source code

     object --+            
              |            
           dict --+        
                  |        
_IndexedSeqFileDict --+    
                      |    
 _SequentialSeqFileDict --+
                          |
                         PhdDict

Indexed dictionary like access to a PHD (PHRED) file.

Instance Methods [hide private]
new empty dictionary

__init__(self, filename, alphabet, key_function)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature
source code

Inherited from _IndexedSeqFileDict: __getitem__, __repr__, __setitem__, __str__, clear, copy, fromkeys, get, items, iteritems, pop, popitem, update, values

Inherited from _IndexedSeqFileDict (private): _record_key

Inherited from dict: __cmp__, __contains__, __delitem__, __eq__, __ge__, __getattribute__, __gt__, __iter__, __le__, __len__, __lt__, __ne__, __new__, __sizeof__, has_key, iterkeys, itervalues, keys, setdefault

Inherited from object: __delattr__, __format__, __reduce__, __reduce_ex__, __setattr__, __subclasshook__

Class Variables [hide private]

Inherited from dict: __hash__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, filename, alphabet, key_function)
(Constructor)

source code 

x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Returns:
new empty dictionary

Overrides: object.__init__
(inherited documentation)