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This module provides code to work with the KEGG Enzyme database.
Functions: parse - Returns an iterator giving Record objects.
Classes: Record -- Holds the information from a KEGG Enzyme record.
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Record Holds info from a KEGG Enzyme record. |
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rxn_wrap =
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name_wrap =
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__package__ =
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Parse a KEGG Enzyme file, returning Record objects. This is an iterator function, typically used in a for loop. For example, using one of the example KEGG files in the Biopython test suite, >>> handle = open("KEGG/enzyme.sample") >>> for record in parse(handle): ... print record.entry, record.name[0] ... 1.1.1.1 Alcohol dehydrogenase 1.1.1.62 Estradiol 17beta-dehydrogenase 1.1.1.68 Transferred to EC 1.7.99.5 1.6.5.3 NADH dehydrogenase (ubiquinone) 1.14.13.28 3,9-Dihydroxypterocarpan 6a-monooxygenase 2.4.1.68 Glycoprotein 6-alpha-L-fucosyltransferase 3.1.1.6 Acetylesterase 2.7.2.1 Acetate kinase |
Run the Bio.KEGG.Enzyme module's doctests. This will try and locate the unit tests directory, and run the doctests from there in order that the relative paths used in the examples work. |
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rxn_wrap
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