samtools-1.24-2.el10_2 RPM for x86_64

From EPEL 10.2 for x86_64 / Packages / s

SAM (Sequence Alignment/Map) is a flexible generic format for storing
nucleotide sequence alignment.
SAM Tools provide various utilities for manipulating alignments in the
SAM format, including sorting, merging, indexing and generating
alignments in a per-position format.

Provides

• samtools
• samtools(x86-64)

Requires

• /usr/bin/perl
• /usr/bin/python3
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.14)(64bit)
• libc.so.6(GLIBC_2.2.5)(64bit)
• libc.so.6(GLIBC_2.3)(64bit)
• libc.so.6(GLIBC_2.3.4)(64bit)
• libc.so.6(GLIBC_2.33)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libc.so.6(GLIBC_ABI_DT_RELR)(64bit)
• libhts.so.3()(64bit)
• libhts.so.3(HTSLIB_1.0)(64bit)
• libhts.so.3(HTSLIB_1.1)(64bit)
• libhts.so.3(HTSLIB_1.10)(64bit)
• libhts.so.3(HTSLIB_1.11)(64bit)
• libhts.so.3(HTSLIB_1.12)(64bit)
• libhts.so.3(HTSLIB_1.14)(64bit)
• libhts.so.3(HTSLIB_1.15)(64bit)
• libhts.so.3(HTSLIB_1.16)(64bit)
• libhts.so.3(HTSLIB_1.17)(64bit)
• libhts.so.3(HTSLIB_1.18)(64bit)
• libhts.so.3(HTSLIB_1.2.1)(64bit)
• libhts.so.3(HTSLIB_1.21)(64bit)
• libhts.so.3(HTSLIB_1.22)(64bit)
• libhts.so.3(HTSLIB_1.23)(64bit)
• libhts.so.3(HTSLIB_1.24)(64bit)
• libhts.so.3(HTSLIB_1.3)(64bit)
• libhts.so.3(HTSLIB_1.4)(64bit)
• libhts.so.3(HTSLIB_1.5)(64bit)
• libhts.so.3(HTSLIB_1.6)(64bit)
• libhts.so.3(HTSLIB_1.7)(64bit)
• libhts.so.3(HTSLIB_1.9)(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.2.5)(64bit)
• libm.so.6(GLIBC_2.29)(64bit)
• libncursesw.so.6()(64bit)
• libtinfo.so.6()(64bit)
• libz.so.1()(64bit)
• perl(File::Find)
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)

License

MIT

Changelog

* Sat Jul 18 2026 Rasmus Ory Nielsen <ron@ron.dk> - 1.24-2
  - Added missing Perl requirement
* Fri Jul 17 2026 Rasmus Ory Nielsen <ron@ron.dk> - 1.24-1
  - Update to 1.24 (#2498633)
* Fri Jul 17 2026 Fedora Release Engineering <releng@fedoraproject.org> - 1.23.1-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_45_Mass_Rebuild
* Thu Mar 19 2026 Rasmus Ory Nielsen <ron@ron.dk> - 1.23.1-1
  - Updated to 1.23.1
* Thu Jan 22 2026 Rasmus Ory Nielsen <ron@ron.dk> - 1.23-1
  - Updated to 1.23
* Sat Jan 17 2026 Fedora Release Engineering <releng@fedoraproject.org> - 1.15.1-9
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_44_Mass_Rebuild
* Mon Jan 05 2026 Marcin Juszkiewicz <mjuszkiewicz@redhat.com> - 1.15.1-8
  - Extend check to handle RISC-V 64-bit architecture port.
* Fri Jul 25 2025 Fedora Release Engineering <releng@fedoraproject.org> - 1.15.1-7
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild
* Sun Jan 19 2025 Fedora Release Engineering <releng@fedoraproject.org> - 1.15.1-6
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild
* Sat Jul 20 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.15.1-5
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild

Files

/usr/bin/ace2sam
/usr/bin/blast2sam.pl
/usr/bin/bowtie2sam.pl
/usr/bin/export2sam.pl
/usr/bin/fasta-sanitize.pl
/usr/bin/interpolate_sam.pl
/usr/bin/maq2sam-long
/usr/bin/maq2sam-short
/usr/bin/md5fa
/usr/bin/md5sum-lite
/usr/bin/novo2sam.pl
/usr/bin/plot-ampliconstats
/usr/bin/plot-bamstats
/usr/bin/psl2sam.pl
/usr/bin/sam2vcf.pl
/usr/bin/samtools
/usr/bin/samtools.pl
/usr/bin/seq_cache_populate.pl
/usr/bin/seq_cache_populate.py
/usr/bin/soap2sam.pl
/usr/bin/wgsim
/usr/bin/wgsim_eval.pl
/usr/bin/zoom2sam.pl
/usr/lib/.build-id
/usr/lib/.build-id/1b
/usr/lib/.build-id/1b/d6be5a684ee0fb285992c13d84e242845b7677
/usr/lib/.build-id/24
/usr/lib/.build-id/24/bdcb50ee5e0a683940feb5d15c9efd2f92abcf
/usr/lib/.build-id/3d
/usr/lib/.build-id/3d/c01a69e2d8ec8d6fa19619b286384aa793539c
/usr/lib/.build-id/60
/usr/lib/.build-id/60/b9e47a23301997830818d361e5746bde9adb24
/usr/lib/.build-id/79
/usr/lib/.build-id/79/269e32b45b3a825eff66cacbdd1c66f5f2b06b
/usr/lib/.build-id/c6
/usr/lib/.build-id/c6/a10c13110ea8e307ce8ebb9e757a8ebf5c5e4b
/usr/lib/.build-id/d9
/usr/lib/.build-id/d9/ab09e6d65efdcd4e6b496151801d0391a19d0f
/usr/share/doc/samtools
/usr/share/doc/samtools/AUTHORS
/usr/share/doc/samtools/ChangeLog.old
/usr/share/doc/samtools/NEWS.md
/usr/share/doc/samtools/examples
/usr/share/doc/samtools/examples/00README.txt
/usr/share/doc/samtools/examples/ex1.fa
/usr/share/doc/samtools/examples/ex1.sam.gz
/usr/share/doc/samtools/examples/toy.fa
/usr/share/doc/samtools/examples/toy.sam
/usr/share/licenses/samtools
/usr/share/licenses/samtools/LICENSE
/usr/share/man/man1/samtools-addreplacerg.1.gz
/usr/share/man/man1/samtools-ampliconclip.1.gz
/usr/share/man/man1/samtools-ampliconstats.1.gz
/usr/share/man/man1/samtools-bedcov.1.gz
/usr/share/man/man1/samtools-calmd.1.gz
/usr/share/man/man1/samtools-cat.1.gz
/usr/share/man/man1/samtools-checksum.1.gz
/usr/share/man/man1/samtools-collate.1.gz
/usr/share/man/man1/samtools-consensus.1.gz
/usr/share/man/man1/samtools-coverage.1.gz
/usr/share/man/man1/samtools-cram-size.1.gz
/usr/share/man/man1/samtools-depad.1.gz
/usr/share/man/man1/samtools-depth.1.gz
/usr/share/man/man1/samtools-dict.1.gz
/usr/share/man/man1/samtools-faidx.1.gz
/usr/share/man/man1/samtools-fasta.1.gz
/usr/share/man/man1/samtools-fastq.1.gz
/usr/share/man/man1/samtools-fixmate.1.gz
/usr/share/man/man1/samtools-flags.1.gz
/usr/share/man/man1/samtools-flagstat.1.gz
/usr/share/man/man1/samtools-fqidx.1.gz
/usr/share/man/man1/samtools-head.1.gz
/usr/share/man/man1/samtools-idxstats.1.gz
/usr/share/man/man1/samtools-import.1.gz
/usr/share/man/man1/samtools-index.1.gz
/usr/share/man/man1/samtools-markdup.1.gz
/usr/share/man/man1/samtools-merge.1.gz
/usr/share/man/man1/samtools-mpileup.1.gz
/usr/share/man/man1/samtools-phase.1.gz
/usr/share/man/man1/samtools-quickcheck.1.gz
/usr/share/man/man1/samtools-reference.1.gz
/usr/share/man/man1/samtools-reheader.1.gz
/usr/share/man/man1/samtools-reset.1.gz
/usr/share/man/man1/samtools-rmdup.1.gz
/usr/share/man/man1/samtools-samples.1.gz
/usr/share/man/man1/samtools-sort.1.gz
/usr/share/man/man1/samtools-split.1.gz
/usr/share/man/man1/samtools-stats.1.gz
/usr/share/man/man1/samtools-targetcut.1.gz
/usr/share/man/man1/samtools-tview.1.gz
/usr/share/man/man1/samtools-view.1.gz
/usr/share/man/man1/samtools.1.gz
/usr/share/man/man1/wgsim.1.gz

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Fabrice Bellet, Thu Aug 13 01:10:32 2026