bowtie-1.3.0-3.fc35 RPM for aarch64

From Fedora 37 for aarch64 / b

Bowtie, an ultrafast, memory-efficient short read aligner for short
DNA sequences (reads) from next-gen sequencers. Please cite: Langmead
B, et al. Ultrafast and memory-efficient alignment of short DNA
sequences to the human genome. Genome Biol 10:R25.

Provides

• bowtie
• bowtie(aarch-64)
• bundled(tiny-thread)

Requires

• /usr/bin/bash
• /usr/bin/perl
• /usr/bin/python3
• /usr/bin/sh
• glibc >= 2.33.9000-43.fc35
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.17)(64bit)
• libc.so.6(GLIBC_2.32)(64bit)
• libc.so.6(GLIBC_2.33)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.17)(64bit)
• libm.so.6(GLIBC_2.27)(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.2)(64bit)
• libstdc++.so.6(CXXABI_1.3.8)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.22)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.26)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• libz.so.1()(64bit)
• libz.so.1(ZLIB_1.2.0.2)(64bit)
• libz.so.1(ZLIB_1.2.3.3)(64bit)
• libz.so.1(ZLIB_1.2.3.5)(64bit)
• python3
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1

License

Artistic 2.0 and zlib

Changelog

* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.0-3
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.3.0-2
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Tue Jul 28 2020 Jun Aruga <jaruga@redhat.com> - 1.3.0-1
  - Update to upstream release 1.3.0
* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.2.3-3
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Tue Mar 17 2020 Jun Aruga <jaruga@redhat.com> - 1.2.3-2
  - Fix the build failure adding perl(FindBin) and perl(lib) build dependencies.
* Fri Feb 28 2020 Jun Aruga <jaruga@redhat.com> - 1.2.3-1
  - Update to upstream release 1.2.3
* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-14
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-13
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild

Files

/usr/bin/bowtie
/usr/bin/bowtie-align-l
/usr/bin/bowtie-align-l-debug
/usr/bin/bowtie-align-s
/usr/bin/bowtie-align-s-debug
/usr/bin/bowtie-build
/usr/bin/bowtie-build-l
/usr/bin/bowtie-build-l-debug
/usr/bin/bowtie-build-s
/usr/bin/bowtie-build-s-debug
/usr/bin/bowtie-inspect
/usr/bin/bowtie-inspect-l
/usr/bin/bowtie-inspect-l-debug
/usr/bin/bowtie-inspect-s
/usr/bin/bowtie-inspect-s-debug
/usr/lib/.build-id
/usr/lib/.build-id/19
/usr/lib/.build-id/19/2cb61e286d053bcca51076b71e3fc4aecd21e8
/usr/lib/.build-id/1d
/usr/lib/.build-id/1d/48e817cc5efbc2fc56f2bffbd8607096f5e666
/usr/lib/.build-id/34
/usr/lib/.build-id/34/3d837aa931df9db18fc07ccc7459f15b718c5a
/usr/lib/.build-id/39
/usr/lib/.build-id/39/74bea5969497cc0e346384c7bbf4f1c396d430
/usr/lib/.build-id/4a
/usr/lib/.build-id/4a/f294d8c8924e6c36b5fcfa73625ef04df9f1cd
/usr/lib/.build-id/7c
/usr/lib/.build-id/7c/864a2eb8dfab749249322a57ae1cf3504f570f
/usr/lib/.build-id/98
/usr/lib/.build-id/98/295e093951a4a1a1e4d9279bfdaed37f4bda65
/usr/lib/.build-id/ab
/usr/lib/.build-id/ab/07428bdc195466a68fbc73c8f84846c5690509
/usr/lib/.build-id/c9
/usr/lib/.build-id/c9/c761ae7d45e50dc97bd015a21721965efdd116
/usr/lib/.build-id/d5
/usr/lib/.build-id/d5/5c6126fa8eb320e8cd1b8e629f09df2dbd5f15
/usr/lib/.build-id/e5
/usr/lib/.build-id/e5/8cf34604b3829fc99becafedf23b1fd9c21edc
/usr/lib/.build-id/f5
/usr/lib/.build-id/f5/69613a60664c525f2dbb4b9d7b8e5b28f61d4b
/usr/share/bowtie
/usr/share/bowtie/genomes
/usr/share/bowtie/genomes/NC_008253.fna
/usr/share/bowtie/indexes
/usr/share/bowtie/indexes/e_coli.1.ebwt
/usr/share/bowtie/indexes/e_coli.2.ebwt
/usr/share/bowtie/indexes/e_coli.3.ebwt
/usr/share/bowtie/indexes/e_coli.4.ebwt
/usr/share/bowtie/indexes/e_coli.README
/usr/share/bowtie/indexes/e_coli.rev.1.ebwt
/usr/share/bowtie/indexes/e_coli.rev.2.ebwt
/usr/share/bowtie/reads
/usr/share/bowtie/reads/e_coli_1000.fa
/usr/share/bowtie/reads/e_coli_1000.fq
/usr/share/bowtie/reads/e_coli_1000.raw
/usr/share/bowtie/reads/e_coli_10000snp.fa
/usr/share/bowtie/reads/e_coli_10000snp.fq
/usr/share/bowtie/reads/e_coli_1000_1.fa
/usr/share/bowtie/reads/e_coli_1000_1.fq
/usr/share/bowtie/reads/e_coli_1000_2.fa
/usr/share/bowtie/reads/e_coli_1000_2.fq
/usr/share/bowtie/reads/e_coli_1000_interleaved.fq
/usr/share/bowtie/scripts
/usr/share/bowtie/scripts/best_verify.pl
/usr/share/bowtie/scripts/bowtie-hbb.sh
/usr/share/bowtie/scripts/bs_mapability.pl
/usr/share/bowtie/scripts/build_test.sh
/usr/share/bowtie/scripts/colorize_fasta.pl
/usr/share/bowtie/scripts/colorize_fastq.pl
/usr/share/bowtie/scripts/convert_quals.pl
/usr/share/bowtie/scripts/fastq_to_tabbed.pl
/usr/share/bowtie/scripts/gen_2b_occ_lookup.pl
/usr/share/bowtie/scripts/gen_dnamasks2colormask.pl
/usr/share/bowtie/scripts/gen_occ_lookup.pl
/usr/share/bowtie/scripts/gen_solqual_lookup.pl
/usr/share/bowtie/scripts/infer_fraglen.pl
/usr/share/bowtie/scripts/make_a_thaliana_tair.sh
/usr/share/bowtie/scripts/make_b_taurus_UMD3.sh
/usr/share/bowtie/scripts/make_c_elegans.sh
/usr/share/bowtie/scripts/make_canFam2.sh
/usr/share/bowtie/scripts/make_d_melanogaster.sh
/usr/share/bowtie/scripts/make_e_coli.sh
/usr/share/bowtie/scripts/make_galGal3.sh
/usr/share/bowtie/scripts/make_h_sapiens_ncbi36.sh
/usr/share/bowtie/scripts/make_h_sapiens_ncbi37.sh
/usr/share/bowtie/scripts/make_hg18.sh
/usr/share/bowtie/scripts/make_hg19.sh
/usr/share/bowtie/scripts/make_m_musculus_ncbi37.sh
/usr/share/bowtie/scripts/make_mm8.sh
/usr/share/bowtie/scripts/make_mm9.sh
/usr/share/bowtie/scripts/make_rn4.sh
/usr/share/bowtie/scripts/make_s_cerevisiae.sh
/usr/share/bowtie/scripts/mapability.pl
/usr/share/bowtie/scripts/pe_verify.pl
/usr/share/bowtie/scripts/reconcile_alignments.pl
/usr/share/bowtie/scripts/reconcile_alignments_pe.pl
/usr/share/bowtie/scripts/run-hbb.sh
/usr/share/doc/bowtie
/usr/share/doc/bowtie/AUTHORS
/usr/share/doc/bowtie/MANUAL
/usr/share/doc/bowtie/NEWS
/usr/share/doc/bowtie/TUTORIAL
/usr/share/doc/bowtie/VERSION
/usr/share/doc/bowtie/manual.html
/usr/share/doc/bowtie/style.css
/usr/share/licenses/bowtie
/usr/share/licenses/bowtie/LICENSE

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Fabrice Bellet, Tue Apr 9 20:55:42 2024