Index | index by Group | index by Distribution | index by Vendor | index by creation date | index by Name | Mirrors | Help | Search |
Name: fastx_toolkit | Distribution: Fedora Project |
Version: 0.0.14 | Vendor: Fedora Project |
Release: 38.fc43 | Build date: Thu Jul 24 05:32:34 2025 |
Group: Unspecified | Build host: buildvm-a64-39.rdu3.fedoraproject.org |
Size: 1119246 | Source RPM: fastx_toolkit-0.0.14-38.fc43.src.rpm |
Packager: Fedora Project | |
Url: http://hannonlab.cshl.edu/fastx_toolkit/index.html | |
Summary: Tools to process short-reads FASTA/FASTQ files |
The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing. Next-Generation sequencing machines usually produce FASTA or FASTQ files, containing multiple short-reads sequences (possibly with quality information). The main processing of such FASTA/FASTQ files is mapping (aka aligning) the sequences to reference genomes or other databases using specialized programs. Example of such mapping programs are: Blat, SHRiMP, LastZ, MAQ and many many others. However, It is sometimes more productive to preprocess the FASTA/FASTQ files before mapping the sequences to the genome - manipulating the sequences to produce better mapping results. The FASTX-Toolkit tools perform some of these preprocessing tasks.
AGPL-3.0-or-later
* Wed Jul 23 2025 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-38 - Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild * Thu Jan 16 2025 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-37 - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild * Wed Jul 17 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-36 - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild * Sun Apr 21 2024 Miroslav Suchý <msuchy@redhat.com> - 0.0.14-35 - convert license to SPDX * Wed Jan 24 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-34 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild * Fri Jan 19 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-33 - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
/usr/bin/fasta_clipping_histogram.pl /usr/bin/fasta_formatter /usr/bin/fasta_nucleotide_changer /usr/bin/fastq_masker /usr/bin/fastq_quality_boxplot_graph.sh /usr/bin/fastq_quality_converter /usr/bin/fastq_quality_filter /usr/bin/fastq_quality_trimmer /usr/bin/fastq_to_fasta /usr/bin/fastx_artifacts_filter /usr/bin/fastx_barcode_splitter.pl /usr/bin/fastx_clipper /usr/bin/fastx_collapser /usr/bin/fastx_nucleotide_distribution_graph.sh /usr/bin/fastx_nucleotide_distribution_line_graph.sh /usr/bin/fastx_quality_stats /usr/bin/fastx_renamer /usr/bin/fastx_reverse_complement /usr/bin/fastx_trimmer /usr/bin/fastx_uncollapser /usr/lib/.build-id /usr/lib/.build-id/04 /usr/lib/.build-id/04/e360cb6201b441295578262ff8b8a035ffa524 /usr/lib/.build-id/08 /usr/lib/.build-id/08/b95f8ab79d87cf6b1203c8d0029fc4c0bbbfa9 /usr/lib/.build-id/16 /usr/lib/.build-id/16/516400c8b6286f8a673b7964409340669f0102 /usr/lib/.build-id/16/8bdb7641b50bd3733e1d05291cb9163ac2d036 /usr/lib/.build-id/26 /usr/lib/.build-id/26/20f73b49360cae159547779f47f058e1d75687 /usr/lib/.build-id/35 /usr/lib/.build-id/35/71fe65617e969c54045dddd78bd7f8496c5047 /usr/lib/.build-id/37 /usr/lib/.build-id/37/844717acf31f0bcb9f40caab6cddae8c6dbe78 /usr/lib/.build-id/57 /usr/lib/.build-id/57/200a9aef32a7fd9466a482f153072ff00bb826 /usr/lib/.build-id/62 /usr/lib/.build-id/62/e44d57a9d5e8c7e4df65a9201958e5a5808f63 /usr/lib/.build-id/7e /usr/lib/.build-id/7e/21ebcd1d41f28cc25e50d93ba2daa28e4afe98 /usr/lib/.build-id/c1 /usr/lib/.build-id/c1/6a085d365260684f7e218632e8749d42a09160 /usr/lib/.build-id/ca /usr/lib/.build-id/ca/49625008a6383c38f3b2a4130c173bbe70509e /usr/lib/.build-id/d8 /usr/lib/.build-id/d8/ae659c901048985483b249822a4d42b3802af6 /usr/lib/.build-id/f5 /usr/lib/.build-id/f5/da163af54c86a2060eabb7553375de76a50658 /usr/lib/.build-id/fe /usr/lib/.build-id/fe/88d9776b07305e359f313c44e4b254d571cb0f /usr/share/doc/fastx_toolkit /usr/share/doc/fastx_toolkit/AUTHORS /usr/share/doc/fastx_toolkit/COPYING /usr/share/doc/fastx_toolkit/NEWS /usr/share/doc/fastx_toolkit/README /usr/share/doc/fastx_toolkit/THANKS
Generated by rpm2html 1.8.1
Fabrice Bellet, Fri Aug 1 00:40:41 2025