fastx_toolkit-0.0.14-38.fc43 RPM for x86_64

From Fedora Rawhide for x86_64 / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(x86-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.14)(64bit)
• libc.so.6(GLIBC_2.2.5)(64bit)
• libc.so.6(GLIBC_2.3.4)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libc.so.6(GLIBC_ABI_DT_RELR)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPL-3.0-or-later

Changelog

* Wed Jul 23 2025 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-38
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_43_Mass_Rebuild
* Thu Jan 16 2025 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-37
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild
* Wed Jul 17 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-36
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild
* Sun Apr 21 2024 Miroslav Suchý <msuchy@redhat.com> - 0.0.14-35
  - convert license to SPDX
* Wed Jan 24 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-34
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Fri Jan 19 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-33
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/07
/usr/lib/.build-id/07/7920a1a7087cf00aa07c08060f00f83d705dba
/usr/lib/.build-id/0c
/usr/lib/.build-id/0c/3d77aac029d4533615851f862cce3fe04a191f
/usr/lib/.build-id/1b
/usr/lib/.build-id/1b/ca180531d12ed5be6569471e37612bee481fe6
/usr/lib/.build-id/34
/usr/lib/.build-id/34/c6f04a579769b99288e0712fdaa5b64896600f
/usr/lib/.build-id/3c
/usr/lib/.build-id/3c/d2dcec30773d38176b3d3f09ef470d176d9f3d
/usr/lib/.build-id/49
/usr/lib/.build-id/49/a37ff92e9c36f97bf9ebf6b9b819a03e75f8fc
/usr/lib/.build-id/54
/usr/lib/.build-id/54/6300fc9767e7048e583a303c4695b2e877e4f6
/usr/lib/.build-id/59
/usr/lib/.build-id/59/b0255f7a0c604363991f8f2cf41b307463baf6
/usr/lib/.build-id/6c
/usr/lib/.build-id/6c/99c4083096c96d63ced3c0b39ec66b6a5b2521
/usr/lib/.build-id/89
/usr/lib/.build-id/89/6ed7423cf081cd82c98a088f9ef0d22732c85a
/usr/lib/.build-id/a2
/usr/lib/.build-id/a2/08056cd1722291dc1bd4410c6d1155475305c6
/usr/lib/.build-id/aa
/usr/lib/.build-id/aa/62f26ad1e8ed093241f98f551169b49a65cf70
/usr/lib/.build-id/b5
/usr/lib/.build-id/b5/85edd8c913b008b4dc7dfad12351631da9ff37
/usr/lib/.build-id/ee
/usr/lib/.build-id/ee/d7d0125417fbce2cc4c94ab050c5de08c54c16
/usr/lib/.build-id/f8
/usr/lib/.build-id/f8/3ae471b407dc78925c8493eb9555705c547cfc
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Mon Aug 11 00:08:08 2025